Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IGHV4-28A0A0C4DH34 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 BX664615.1-201ENST00000443558 458 ntBASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AL049597.2-201ENST00000565575 961 ntBASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC093484.2-201ENST00000580996 2166 ntBASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IGHV4-28A0A0C4DH34 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 AL032819.2-201ENST00000624543 2162 ntBASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 KRT8P45-201ENST00000414328 1447 ntBASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
IGHV4-28A0A0C4DH34 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.6□□□□□ -0.23
IGHV4-28A0A0C4DH34 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
IGHV4-28A0A0C4DH34 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IGHV4-28A0A0C4DH34 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
IGHV4-28A0A0C4DH34 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
IGHV4-28A0A0C4DH34 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms