Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 AC073111.5-205ENST00000641717 521 ntBASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV5A0A0B4J249 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 RARRES2P6-201ENST00000567333 442 ntBASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV5A0A0B4J249 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 MIR663A-201ENST00000385250 93 ntBASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV5A0A0B4J249 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms