Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 KRT16P1-201ENST00000399124 1418 ntBASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DRB4X5D2U9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 AF186192.3-201ENST00000583427 947 ntBASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DRB4X5D2U9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 AC026271.3-201ENST00000571884 352 ntBASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DRB4X5D2U9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DRB4X5D2U9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DRB4X5D2U9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DRB4X5D2U9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB4X5D2U9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DRB4X5D2U9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DRB4X5D2U9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms