Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX11Q9Y5W9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 HBZP1-201ENST00000354915 429 ntBASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.69■□□□□ 0.58
SNX11Q9Y5W9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 AC092597.1-201ENST00000487352 616 ntBASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 AL691432.3-201ENST00000621860 400 ntBASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX11Q9Y5W9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 TSPY23P-201ENST00000440136 739 ntBASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 RASA4DP-201ENST00000460726 1199 ntBASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 AC092119.3-201ENST00000612618 583 ntBASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms