Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 GPAT2P1-201ENST00000444924 1672 ntBASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 CYP2D8P-201ENST00000433633 1490 ntBASIC21.01■□□□□ 0.95
BLOC1S4Q9NUP1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 AL023284.2-201ENST00000405850 579 ntBASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21■□□□□ 0.95
BLOC1S4Q9NUP1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
BLOC1S4Q9NUP1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 AC008556.1-201ENST00000610908 2040 ntBASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S4Q9NUP1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 AL357033.4-201ENST00000617703 1807 ntBASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 AL109659.2-201ENST00000606809 1674 ntBASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms