Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3AQ9NNX9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 AC105233.4-201ENST00000642045 216 ntBASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VCX3AQ9NNX9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
VCX3AQ9NNX9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.64■□□□□ 0.42
VCX3AQ9NNX9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VCX3AQ9NNX9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.42
VCX3AQ9NNX9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.64■□□□□ 0.42
VCX3AQ9NNX9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 AL645608.8-201ENST00000606034 2086 ntBASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 UNC93B8-201ENST00000511903 705 ntBASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 KRT8P17-201ENST00000453110 1448 ntBASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCX3AQ9NNX9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCX3AQ9NNX9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms