Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 AC124016.1-201ENST00000609552 612 ntBASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRTM1Q9HBL6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 AC135050.7-201ENST00000624508 2218 ntBASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRTM1Q9HBL6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 POU5F1P3-201ENST00000428824 1078 ntBASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC133681.1-201ENST00000465482 601 ntBASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC110285.5-201ENST00000611501 352 ntBASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AL445675.2-201ENST00000620291 557 ntBASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 AC007613.1-201ENST00000572811 2597 ntBASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRTM1Q9HBL6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRTM1Q9HBL6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.14■□□□□ 0.5
LRTM1Q9HBL6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRTM1Q9HBL6 AC079598.2-202ENST00000546624 1451 ntBASIC18.14■□□□□ 0.5
LRTM1Q9HBL6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRTM1Q9HBL6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRTM1Q9HBL6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms