Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.64■□□□□ 0.89
HIPK3Q9H422 SLC25A6P4-201ENST00000586535 553 ntBASIC20.64■□□□□ 0.89
HIPK3Q9H422 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.64■□□□□ 0.89
HIPK3Q9H422 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.64■□□□□ 0.89
HIPK3Q9H422 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 AC138894.3-201ENST00000603787 634 ntBASIC20.63■□□□□ 0.89
HIPK3Q9H422 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIPK3Q9H422 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
HIPK3Q9H422 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIPK3Q9H422 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIPK3Q9H422 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 AL662844.1-201ENST00000546340 181 ntBASIC20.62■□□□□ 0.89
HIPK3Q9H422 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIPK3Q9H422 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIPK3Q9H422 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIPK3Q9H422 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIPK3Q9H422 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.62■□□□□ 0.89
HIPK3Q9H422 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 AC074051.2-201ENST00000565115 352 ntBASIC20.61■□□□□ 0.89
HIPK3Q9H422 AC090616.6-201ENST00000582640 721 ntBASIC20.61■□□□□ 0.89
HIPK3Q9H422 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HIPK3Q9H422 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIPK3Q9H422 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.6■□□□□ 0.89
HIPK3Q9H422 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 AC005332.3-201ENST00000589904 676 ntBASIC20.6■□□□□ 0.89
HIPK3Q9H422 AL121912.1-201ENST00000603683 238 ntBASIC20.6■□□□□ 0.89
HIPK3Q9H422 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIPK3Q9H422 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms