Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC3Q9BY71 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC3Q9BY71 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 SEC1P-202ENST00000473944 940 ntBASIC19.7■□□□□ 0.74
LRRC3Q9BY71 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC3Q9BY71 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 KRT18P48-201ENST00000434763 852 ntBASIC19.69■□□□□ 0.74
LRRC3Q9BY71 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 DUSP5P1-201ENST00000441325 1139 ntBASIC19.69■□□□□ 0.74
LRRC3Q9BY71 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC3Q9BY71 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 KRT126P-201ENST00000549467 1181 ntBASIC19.68■□□□□ 0.74
LRRC3Q9BY71 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.68■□□□□ 0.74
LRRC3Q9BY71 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 AFG3L1P-217ENST00000557444 2447 ntBASIC19.68■□□□□ 0.74
LRRC3Q9BY71 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 PCDHAC2-203ENST00000615316 3011 ntBASIC19.68■□□□□ 0.74
LRRC3Q9BY71 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC3Q9BY71 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 AC034232.1-201ENST00000506026 1064 ntBASIC19.67■□□□□ 0.74
LRRC3Q9BY71 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 AC079602.3-201ENST00000623931 403 ntBASIC19.67■□□□□ 0.74
LRRC3Q9BY71 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC3Q9BY71 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC3Q9BY71 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC3Q9BY71 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC3Q9BY71 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC3Q9BY71 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms