Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 TSPY21P-201ENST00000433481 731 ntBASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 HOMER2P1-201ENST00000455653 964 ntBASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 PRSS44-201ENST00000515154 1146 ntBASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 AP000550.4-202ENST00000639755 178 ntBASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RPAP1Q9BWH6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPAP1Q9BWH6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 AC011558.1-201ENST00000623459 338 ntBASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 AL049812.1-201ENST00000432563 2267 ntBASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPAP1Q9BWH6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 AL031432.5-201ENST00000641059 760 ntBASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPAP1Q9BWH6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms