Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 AC126335.2-201ENST00000623362 4637 ntBASIC13.21□□□□□ -0.29
VPS25Q9BRG1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC13.21□□□□□ -0.29
VPS25Q9BRG1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 AC097376.2-205ENST00000610159 5334 ntBASIC13.21□□□□□ -0.29
VPS25Q9BRG1 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VPS25Q9BRG1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
VPS25Q9BRG1 AL122018.1-201ENST00000446607 2310 ntBASIC13.21□□□□□ -0.3
VPS25Q9BRG1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 AC007225.1-201ENST00000566331 1836 ntBASIC13.2□□□□□ -0.3
VPS25Q9BRG1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 PCDHB19P-201ENST00000570871 2371 ntBASIC13.2□□□□□ -0.3
VPS25Q9BRG1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS25Q9BRG1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 AC104581.4-201ENST00000623126 3052 ntBASIC13.19□□□□□ -0.3
VPS25Q9BRG1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 LINC02199-201ENST00000506655 2702 ntBASIC13.19□□□□□ -0.3
VPS25Q9BRG1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 AC087386.2-201ENST00000623212 4637 ntBASIC13.19□□□□□ -0.3
VPS25Q9BRG1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS25Q9BRG1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
VPS25Q9BRG1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms