Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 AC068587.9-201ENST00000641814 219 ntBASIC13.96□□□□□ -0.17
ODF3Q96PU9 AL031985.4-201ENST00000642138 673 ntBASIC13.96□□□□□ -0.17
ODF3Q96PU9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 AC073592.3-201ENST00000625118 1834 ntBASIC13.96□□□□□ -0.17
ODF3Q96PU9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF3Q96PU9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF3Q96PU9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ODF3Q96PU9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ODF3Q96PU9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.96□□□□□ -0.18
ODF3Q96PU9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.96□□□□□ -0.18
ODF3Q96PU9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ODF3Q96PU9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 AC128676.1-201ENST00000454392 318 ntBASIC13.95□□□□□ -0.18
ODF3Q96PU9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF3Q96PU9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF3Q96PU9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 AC091390.4-202ENST00000476426 537 ntBASIC13.94□□□□□ -0.18
ODF3Q96PU9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 CD99P1-205ENST00000527459 561 ntBASIC13.94□□□□□ -0.18
ODF3Q96PU9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 AC073195.1-201ENST00000607241 877 ntBASIC13.94□□□□□ -0.18
ODF3Q96PU9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF3Q96PU9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF3Q96PU9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms