Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 AC008764.6-201ENST00000595909 2069 ntBASIC9.22□□□□□ -0.93
PRAC1Q96KF2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC9.22□□□□□ -0.93
PRAC1Q96KF2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 AC144831.1-201ENST00000573312 2656 ntBASIC9.21□□□□□ -0.93
PRAC1Q96KF2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 KC6-207ENST00000600644 2311 ntTSL 3 BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC9.21□□□□□ -0.93
PRAC1Q96KF2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PRAC1Q96KF2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 AL161729.1-201ENST00000604104 1402 ntBASIC9.21□□□□□ -0.94
PRAC1Q96KF2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PRAC1Q96KF2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 CICP20-201ENST00000443330 2801 ntBASIC9.2□□□□□ -0.94
PRAC1Q96KF2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 PP12613-201ENST00000424958 2230 ntBASIC9.2□□□□□ -0.94
PRAC1Q96KF2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC9.2□□□□□ -0.94
PRAC1Q96KF2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms