Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 AC006333.2-201ENST00000607957 2099 ntBASIC18.62■□□□□ 0.57
SPDL1Q96EA4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 AC010980.2-201ENST00000587099 1412 ntBASIC18.61■□□□□ 0.57
SPDL1Q96EA4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SPDL1Q96EA4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPDL1Q96EA4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 AL356309.3-201ENST00000624132 1934 ntBASIC18.59■□□□□ 0.57
SPDL1Q96EA4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 OR10C1-204ENST00000622521 1039 ntBASIC18.59■□□□□ 0.57
SPDL1Q96EA4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 KRT17P1-201ENST00000399211 1546 ntBASIC18.59■□□□□ 0.57
SPDL1Q96EA4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SPDL1Q96EA4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPDL1Q96EA4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.58■□□□□ 0.57
SPDL1Q96EA4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPDL1Q96EA4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms