Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HPS1Q92902 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS1Q92902 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HPS1Q92902 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HPS1Q92902 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS1Q92902 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.22■□□□□ 0.35
HPS1Q92902 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS1Q92902 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.22■□□□□ 0.35
HPS1Q92902 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS1Q92902 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.22■□□□□ 0.35
HPS1Q92902 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 AP003097.1-201ENST00000530657 1135 ntBASIC17.22■□□□□ 0.35
HPS1Q92902 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HPS1Q92902 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HPS1Q92902 AC006058.3-201ENST00000606217 1069 ntBASIC17.22■□□□□ 0.35
HPS1Q92902 HLA-B-256ENST00000639848 1089 ntBASIC17.22■□□□□ 0.35
HPS1Q92902 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HPS1Q92902 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS1Q92902 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HPS1Q92902 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS1Q92902 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS1Q92902 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS1Q92902 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS1Q92902 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.21■□□□□ 0.35
HPS1Q92902 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS1Q92902 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HPS1Q92902 GCSHP5-201ENST00000443090 522 ntBASIC17.21■□□□□ 0.35
HPS1Q92902 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS1Q92902 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.21■□□□□ 0.35
HPS1Q92902 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.21■□□□□ 0.35
HPS1Q92902 AL356652.1-201ENST00000615962 565 ntBASIC17.21■□□□□ 0.35
HPS1Q92902 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS1Q92902 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS1Q92902 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HPS1Q92902 AC046158.3-201ENST00000624947 2558 ntBASIC17.21■□□□□ 0.35
HPS1Q92902 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.34
HPS1Q92902 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
HPS1Q92902 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HPS1Q92902 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
HPS1Q92902 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HPS1Q92902 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.2■□□□□ 0.34
HPS1Q92902 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.2■□□□□ 0.34
HPS1Q92902 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.2■□□□□ 0.34
HPS1Q92902 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPS1Q92902 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HPS1Q92902 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms