Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 AL138781.1-201ENST00000566567 1274 ntBASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC44A1Q8WWI5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 RCC2P6-201ENST00000526625 1557 ntBASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 UNC93B4-201ENST00000505679 747 ntBASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC44A1Q8WWI5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 MTMR9LP-203ENST00000426597 1545 ntBASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC44A1Q8WWI5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 NBPF21P-201ENST00000425093 1451 ntBASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 HLA-L-209ENST00000420110 1011 ntBASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 POM121L13P-201ENST00000422362 380 ntBASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC44A1Q8WWI5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms