Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF139Q8WU17 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF139Q8WU17 AL353719.1-201ENST00000566847 864 ntBASIC19.83■□□□□ 0.77
RNF139Q8WU17 AL023803.3-201ENST00000615559 522 ntBASIC19.83■□□□□ 0.77
RNF139Q8WU17 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF139Q8WU17 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF139Q8WU17 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF139Q8WU17 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF139Q8WU17 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RNF139Q8WU17 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF139Q8WU17 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF139Q8WU17 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF139Q8WU17 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF139Q8WU17 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 INGX-201ENST00000359239 846 ntBASIC19.82■□□□□ 0.76
RNF139Q8WU17 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 AC007663.1-201ENST00000438948 1240 ntBASIC19.82■□□□□ 0.76
RNF139Q8WU17 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 AC010653.2-201ENST00000623505 997 ntBASIC19.82■□□□□ 0.76
RNF139Q8WU17 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 AC092338.2-201ENST00000568827 1415 ntBASIC19.82■□□□□ 0.76
RNF139Q8WU17 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RNF139Q8WU17 AC018445.3-201ENST00000624177 1945 ntBASIC19.82■□□□□ 0.76
RNF139Q8WU17 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF139Q8WU17 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF139Q8WU17 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF139Q8WU17 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF139Q8WU17 SLC25A3P1-201ENST00000443844 931 ntBASIC19.81■□□□□ 0.76
RNF139Q8WU17 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF139Q8WU17 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF139Q8WU17 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 FEM1AP3-201ENST00000403722 1741 ntBASIC19.81■□□□□ 0.76
RNF139Q8WU17 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
RNF139Q8WU17 IRX1P1-201ENST00000438849 1838 ntBASIC19.81■□□□□ 0.76
RNF139Q8WU17 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF139Q8WU17 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 LIN28AP1-201ENST00000429574 405 ntBASIC19.8■□□□□ 0.76
RNF139Q8WU17 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms