Protein–RNA interactions for Protein: Q8TA94

ZNF563, Zinc finger protein 563, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563Q8TA94 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 TNXA-203ENST00000507684 2038 ntBASIC17.38■□□□□ 0.37
ZNF563Q8TA94 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF563Q8TA94 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.37■□□□□ 0.37
ZNF563Q8TA94 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF563Q8TA94 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 AC012618.2-201ENST00000428058 849 ntBASIC17.36■□□□□ 0.37
ZNF563Q8TA94 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF563Q8TA94 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 MIR718-201ENST00000390190 70 ntBASIC17.35■□□□□ 0.37
ZNF563Q8TA94 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 AC091390.4-202ENST00000476426 537 ntBASIC17.35■□□□□ 0.37
ZNF563Q8TA94 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 MIR6786-201ENST00000616843 113 ntBASIC17.35■□□□□ 0.37
ZNF563Q8TA94 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 AP006294.2-201ENST00000641667 209 ntBASIC17.35■□□□□ 0.37
ZNF563Q8TA94 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 FSCN1P1-201ENST00000568912 1481 ntBASIC17.35■□□□□ 0.37
ZNF563Q8TA94 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF563Q8TA94 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms