Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DNAAF1Q8NEP3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.64■□□□□ 0.25
DNAAF1Q8NEP3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DNAAF1Q8NEP3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 AL354751.1-201ENST00000412768 1863 ntBASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DNAAF1Q8NEP3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 AL138781.1-201ENST00000566567 1274 ntBASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 AL121829.2-201ENST00000620908 328 ntBASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 KRT8P8-201ENST00000434750 1448 ntBASIC16.62■□□□□ 0.25
DNAAF1Q8NEP3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 PKD1P1-201ENST00000458669 6805 ntBASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 AC120498.8-201ENST00000614275 531 ntBASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
DNAAF1Q8NEP3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms