Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 SUDS3P1-201ENST00000505831 966 ntBASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD2Q8IV50 AL162727.3-201ENST00000635661 2787 ntBASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LYSMD2Q8IV50 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 PHGDH-210ENST00000641115 1638 ntBASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 AC110285.6-201ENST00000617652 491 ntBASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.59■□□□□ 0.25
LYSMD2Q8IV50 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LYSMD2Q8IV50 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms