Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 KRT16P6-202ENST00000425692 1426 ntBASIC12.5□□□□□ -0.41
SCXQ7RTU7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCXQ7RTU7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SCXQ7RTU7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 BID-203ENST00000399765 1879 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 AC092720.2-201ENST00000602388 1665 ntBASIC12.49□□□□□ -0.41
SCXQ7RTU7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 RCN1P1-201ENST00000400413 996 ntBASIC12.49□□□□□ -0.41
SCXQ7RTU7 MIR1238-201ENST00000408483 83 ntBASIC12.49□□□□□ -0.41
SCXQ7RTU7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCXQ7RTU7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.49□□□□□ -0.41
SCXQ7RTU7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 AC116351.2-201ENST00000606540 1585 ntBASIC12.48□□□□□ -0.41
SCXQ7RTU7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 AC079598.2-202ENST00000546624 1451 ntBASIC12.48□□□□□ -0.41
SCXQ7RTU7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 C1QL1P1-201ENST00000568105 661 ntBASIC12.48□□□□□ -0.41
SCXQ7RTU7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCXQ7RTU7 MIR6786-201ENST00000616843 113 ntBASIC12.48□□□□□ -0.41
SCXQ7RTU7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SCXQ7RTU7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms