Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRFAM7AQ494W8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRFAM7AQ494W8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 HLA-G-202ENST00000376815 851 ntBASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 HLA-G-203ENST00000376818 1127 ntBASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 FAM197Y1-201ENST00000421178 764 ntBASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 KRT16P5-201ENST00000455284 522 ntBASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRFAM7AQ494W8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 NEFHP1-201ENST00000412845 2629 ntBASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 UNC93B2-201ENST00000285383 730 ntBASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 AC113347.1-201ENST00000413321 391 ntBASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRFAM7AQ494W8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHRFAM7AQ494W8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.52■□□□□ 0.23
CHRFAM7AQ494W8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHRFAM7AQ494W8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHRFAM7AQ494W8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.52■□□□□ 0.23
CHRFAM7AQ494W8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHRFAM7AQ494W8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 AL137013.1-201ENST00000432946 1228 ntBASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 AC073195.1-201ENST00000607241 877 ntBASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 LINC01568-207ENST00000641790 1380 ntBASIC16.51■□□□□ 0.23
CHRFAM7AQ494W8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms