Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH1Q08174 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH1Q08174 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH1Q08174 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH1Q08174 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH1Q08174 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH1Q08174 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH1Q08174 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH1Q08174 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH1Q08174 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
PCDH1Q08174 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PCDH1Q08174 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH1Q08174 HEIH-201ENST00000623091 1652 ntBASIC18.23■□□□□ 0.51
PCDH1Q08174 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.23■□□□□ 0.51
PCDH1Q08174 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH1Q08174 FAM197Y1-201ENST00000421178 764 ntBASIC18.23■□□□□ 0.51
PCDH1Q08174 NUDT16P1-203ENST00000513809 620 ntBASIC18.23■□□□□ 0.51
PCDH1Q08174 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH1Q08174 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH1Q08174 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH1Q08174 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
PCDH1Q08174 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
PCDH1Q08174 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH1Q08174 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH1Q08174 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH1Q08174 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDH1Q08174 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDH1Q08174 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDH1Q08174 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
PCDH1Q08174 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDH1Q08174 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 AC113410.3-201ENST00000623366 203 ntBASIC18.22■□□□□ 0.51
PCDH1Q08174 AL049637.2-201ENST00000641778 930 ntBASIC18.22■□□□□ 0.51
PCDH1Q08174 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH1Q08174 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH1Q08174 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH1Q08174 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
PCDH1Q08174 AL158047.1-201ENST00000445918 881 ntBASIC18.21■□□□□ 0.51
PCDH1Q08174 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH1Q08174 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDH1Q08174 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH1Q08174 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH1Q08174 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
PCDH1Q08174 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDH1Q08174 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDH1Q08174 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDH1Q08174 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH1Q08174 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms