Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.21□□□□□ -0.29
CKS1BP61024 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CKS1BP61024 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS1BP61024 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.21□□□□□ -0.3
CKS1BP61024 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CKS1BP61024 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS1BP61024 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.21□□□□□ -0.3
CKS1BP61024 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS1BP61024 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CKS1BP61024 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CKS1BP61024 KRT8P17-201ENST00000453110 1448 ntBASIC13.21□□□□□ -0.3
CKS1BP61024 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CKS1BP61024 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.21□□□□□ -0.3
CKS1BP61024 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 AP001271.2-201ENST00000624018 1556 ntBASIC13.2□□□□□ -0.3
CKS1BP61024 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CKS1BP61024 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 HLA-G-202ENST00000376815 851 ntBASIC13.2□□□□□ -0.3
CKS1BP61024 HLA-G-203ENST00000376818 1127 ntBASIC13.2□□□□□ -0.3
CKS1BP61024 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.2□□□□□ -0.3
CKS1BP61024 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.2□□□□□ -0.3
CKS1BP61024 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CKS1BP61024 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 KRT8P20-201ENST00000423953 1409 ntBASIC13.2□□□□□ -0.3
CKS1BP61024 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CKS1BP61024 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CKS1BP61024 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.2□□□□□ -0.3
CKS1BP61024 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS1BP61024 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS1BP61024 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS1BP61024 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 PCDHA12-202ENST00000613593 2588 ntBASIC13.19□□□□□ -0.3
CKS1BP61024 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CKS1BP61024 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.19□□□□□ -0.3
CKS1BP61024 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.19□□□□□ -0.3
CKS1BP61024 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.19□□□□□ -0.3
CKS1BP61024 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CKS1BP61024 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.19□□□□□ -0.3
CKS1BP61024 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CKS1BP61024 UBE2DNL-204ENST00000602536 740 ntBASIC13.19□□□□□ -0.3
CKS1BP61024 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.19□□□□□ -0.3
CKS1BP61024 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.19□□□□□ -0.3
CKS1BP61024 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CKS1BP61024 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CKS1BP61024 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms