Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.82■□□□□ 0.92
ACLYP53396 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.82■□□□□ 0.92
ACLYP53396 TCF3P1-201ENST00000423021 1937 ntBASIC20.82■□□□□ 0.92
ACLYP53396 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.82■□□□□ 0.92
ACLYP53396 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 AC008556.1-201ENST00000610908 2040 ntBASIC20.82■□□□□ 0.92
ACLYP53396 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ACLYP53396 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.82■□□□□ 0.92
ACLYP53396 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.82■□□□□ 0.92
ACLYP53396 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.82■□□□□ 0.92
ACLYP53396 KRT16P4-201ENST00000453883 522 ntBASIC20.82■□□□□ 0.92
ACLYP53396 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.82■□□□□ 0.92
ACLYP53396 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 AL662844.1-201ENST00000546340 181 ntBASIC20.82■□□□□ 0.92
ACLYP53396 AL121912.1-201ENST00000603683 238 ntBASIC20.82■□□□□ 0.92
ACLYP53396 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 RCC2P3-201ENST00000418112 1537 ntBASIC20.82■□□□□ 0.92
ACLYP53396 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ACLYP53396 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.82■□□□□ 0.92
ACLYP53396 AC233702.3-201ENST00000578656 1387 ntBASIC20.82■□□□□ 0.92
ACLYP53396 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.82■□□□□ 0.92
ACLYP53396 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ACLYP53396 AC092667.1-201ENST00000434301 2586 ntBASIC20.82■□□□□ 0.92
ACLYP53396 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ACLYP53396 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.81■□□□□ 0.92
ACLYP53396 LINC00167-201ENST00000530583 1419 ntBASIC20.81■□□□□ 0.92
ACLYP53396 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.81■□□□□ 0.92
ACLYP53396 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.81■□□□□ 0.92
ACLYP53396 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 MRPL3P1-201ENST00000400109 1033 ntBASIC20.81■□□□□ 0.92
ACLYP53396 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.81■□□□□ 0.92
ACLYP53396 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.81■□□□□ 0.92
ACLYP53396 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.81■□□□□ 0.92
ACLYP53396 AL353801.3-201ENST00000609898 542 ntBASIC20.81■□□□□ 0.92
ACLYP53396 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ACLYP53396 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.8■□□□□ 0.92
ACLYP53396 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.8■□□□□ 0.92
ACLYP53396 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.8■□□□□ 0.92
ACLYP53396 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.8■□□□□ 0.92
ACLYP53396 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
ACLYP53396 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.8■□□□□ 0.92
ACLYP53396 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
ACLYP53396 AC099336.1-202ENST00000602961 463 ntBASIC20.8■□□□□ 0.92
ACLYP53396 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
ACLYP53396 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ACLYP53396 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ACLYP53396 AL512353.2-201ENST00000448759 1962 ntBASIC20.79■□□□□ 0.92
ACLYP53396 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ACLYP53396 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.79■□□□□ 0.92
ACLYP53396 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ACLYP53396 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.79■□□□□ 0.92
ACLYP53396 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.79■□□□□ 0.92
ACLYP53396 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.79■□□□□ 0.92
ACLYP53396 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.79■□□□□ 0.92
ACLYP53396 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ACLYP53396 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ACLYP53396 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ACLYP53396 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.78■□□□□ 0.92
ACLYP53396 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms