Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.27■□□□□ 0.36
HMGA2P52926 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.27■□□□□ 0.36
HMGA2P52926 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.27■□□□□ 0.36
HMGA2P52926 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HMGA2P52926 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGA2P52926 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGA2P52926 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGA2P52926 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGA2P52926 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.27■□□□□ 0.35
HMGA2P52926 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGA2P52926 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGA2P52926 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 AL499627.1-201ENST00000569373 2188 ntBASIC17.26■□□□□ 0.35
HMGA2P52926 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 KRT8P32-201ENST00000512863 1461 ntBASIC17.26■□□□□ 0.35
HMGA2P52926 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGA2P52926 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGA2P52926 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HMGA2P52926 POU5F1P3-201ENST00000428824 1078 ntBASIC17.26■□□□□ 0.35
HMGA2P52926 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGA2P52926 UNC93B4-201ENST00000505679 747 ntBASIC17.26■□□□□ 0.35
HMGA2P52926 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGA2P52926 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGA2P52926 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGA2P52926 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
HMGA2P52926 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGA2P52926 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGA2P52926 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.25■□□□□ 0.35
HMGA2P52926 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMGA2P52926 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGA2P52926 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HMGA2P52926 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMGA2P52926 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HMGA2P52926 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGA2P52926 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGA2P52926 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGA2P52926 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.25■□□□□ 0.35
HMGA2P52926 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGA2P52926 MYC-208ENST00000641036 567 ntBASIC17.25■□□□□ 0.35
HMGA2P52926 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGA2P52926 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
HMGA2P52926 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
HMGA2P52926 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HMGA2P52926 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HMGA2P52926 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 SLC25A6P5-201ENST00000435663 894 ntBASIC17.24■□□□□ 0.35
HMGA2P52926 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGA2P52926 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGA2P52926 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGA2P52926 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
HMGA2P52926 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGA2P52926 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGA2P52926 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGA2P52926 NBPF21P-201ENST00000425093 1451 ntBASIC17.24■□□□□ 0.35
HMGA2P52926 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGA2P52926 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGA2P52926 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms