Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 AC020763.4-201ENST00000623414 4170 ntBASIC19.63■□□□□ 0.73
FNTAP49354 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.63■□□□□ 0.73
FNTAP49354 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FNTAP49354 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.63■□□□□ 0.73
FNTAP49354 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FNTAP49354 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNTAP49354 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 ABALON-201ENST00000629058 1903 ntBASIC19.63■□□□□ 0.73
FNTAP49354 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.63■□□□□ 0.73
FNTAP49354 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FNTAP49354 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.62■□□□□ 0.73
FNTAP49354 NCF1B-203ENST00000435988 1254 ntBASIC19.62■□□□□ 0.73
FNTAP49354 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.62■□□□□ 0.73
FNTAP49354 AL160286.2-201ENST00000567150 934 ntBASIC19.62■□□□□ 0.73
FNTAP49354 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 AC083880.1-201ENST00000608266 535 ntBASIC19.62■□□□□ 0.73
FNTAP49354 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FNTAP49354 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FNTAP49354 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNTAP49354 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.61■□□□□ 0.73
FNTAP49354 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.61■□□□□ 0.73
FNTAP49354 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FNTAP49354 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FNTAP49354 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.61■□□□□ 0.73
FNTAP49354 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FNTAP49354 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.61■□□□□ 0.73
FNTAP49354 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.61■□□□□ 0.73
FNTAP49354 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.61■□□□□ 0.73
FNTAP49354 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FNTAP49354 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.61■□□□□ 0.73
FNTAP49354 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNTAP49354 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
FNTAP49354 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms