Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.44■□□□□ 0.38
HTR3AP46098 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR3AP46098 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR3AP46098 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HTR3AP46098 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR3AP46098 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.44■□□□□ 0.38
HTR3AP46098 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HTR3AP46098 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HTR3AP46098 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR3AP46098 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HTR3AP46098 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 ABHD17AP1-201ENST00000358206 933 ntBASIC17.43■□□□□ 0.38
HTR3AP46098 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HTR3AP46098 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR3AP46098 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR3AP46098 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.43■□□□□ 0.38
HTR3AP46098 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.43■□□□□ 0.38
HTR3AP46098 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.43■□□□□ 0.38
HTR3AP46098 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR3AP46098 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HTR3AP46098 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR3AP46098 TEX21P-204ENST00000641479 1693 ntBASIC17.42■□□□□ 0.38
HTR3AP46098 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR3AP46098 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR3AP46098 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR3AP46098 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 AC135050.7-201ENST00000624508 2218 ntBASIC17.42■□□□□ 0.38
HTR3AP46098 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR3AP46098 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR3AP46098 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.42■□□□□ 0.38
HTR3AP46098 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR3AP46098 GCSHP5-201ENST00000443090 522 ntBASIC17.42■□□□□ 0.38
HTR3AP46098 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR3AP46098 AF186192.3-201ENST00000583427 947 ntBASIC17.42■□□□□ 0.38
HTR3AP46098 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR3AP46098 AC073195.1-201ENST00000607241 877 ntBASIC17.42■□□□□ 0.38
HTR3AP46098 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR3AP46098 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR3AP46098 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR3AP46098 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 KRT16P1-201ENST00000399124 1418 ntBASIC17.41■□□□□ 0.38
HTR3AP46098 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR3AP46098 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HTR3AP46098 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.41■□□□□ 0.38
HTR3AP46098 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 AC026271.3-201ENST00000571884 352 ntBASIC17.41■□□□□ 0.38
HTR3AP46098 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.41■□□□□ 0.38
HTR3AP46098 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 AP001412.1-201ENST00000608405 714 ntBASIC17.41■□□□□ 0.38
HTR3AP46098 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HTR3AP46098 AC104581.1-202ENST00000635932 2618 ntBASIC17.41■□□□□ 0.38
HTR3AP46098 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR3AP46098 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR3AP46098 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms