Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC1A1P43005 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC1A1P43005 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 AL353807.1-201ENST00000427475 662 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC1A1P43005 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 AP002982.1-201ENST00000492365 877 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.79■□□□□ 0.76
SLC1A1P43005 AC006058.3-201ENST00000606217 1069 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC1A1P43005 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 AC068587.9-201ENST00000641814 219 ntBASIC19.79■□□□□ 0.76
SLC1A1P43005 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC1A1P43005 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC1A1P43005 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SLC1A1P43005 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
SLC1A1P43005 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC1A1P43005 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.78■□□□□ 0.76
SLC1A1P43005 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC1A1P43005 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC1A1P43005 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC1A1P43005 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC1A1P43005 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC1A1P43005 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC1A1P43005 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC1A1P43005 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SLC1A1P43005 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC1A1P43005 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC1A1P43005 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC1A1P43005 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC1A1P43005 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC1A1P43005 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 KRT8P32-201ENST00000512863 1461 ntBASIC19.77■□□□□ 0.76
SLC1A1P43005 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC1A1P43005 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC1A1P43005 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC1A1P43005 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC1A1P43005 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC1A1P43005 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC1A1P43005 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC1A1P43005 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SLC1A1P43005 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 AL390961.4-201ENST00000623958 2535 ntBASIC19.76■□□□□ 0.75
SLC1A1P43005 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 AC128676.1-201ENST00000454392 318 ntBASIC19.76■□□□□ 0.75
SLC1A1P43005 RPS2P4-201ENST00000476944 856 ntBASIC19.76■□□□□ 0.75
SLC1A1P43005 AC026271.3-201ENST00000571884 352 ntBASIC19.76■□□□□ 0.75
SLC1A1P43005 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SLC1A1P43005 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC1A1P43005 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms