Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL13AP40429 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.04□□□□□ -0.32
RPL13AP40429 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.04□□□□□ -0.32
RPL13AP40429 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL13AP40429 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.04□□□□□ -0.32
RPL13AP40429 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL13AP40429 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RPL13AP40429 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.04□□□□□ -0.32
RPL13AP40429 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL13AP40429 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL13AP40429 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL13AP40429 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.03□□□□□ -0.32
RPL13AP40429 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RPL13AP40429 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.03□□□□□ -0.32
RPL13AP40429 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
RPL13AP40429 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.03□□□□□ -0.32
RPL13AP40429 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.03□□□□□ -0.32
RPL13AP40429 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
RPL13AP40429 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 MIR572-201ENST00000384983 95 ntBASIC13.03□□□□□ -0.32
RPL13AP40429 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.03□□□□□ -0.32
RPL13AP40429 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RPL13AP40429 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RPL13AP40429 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RPL13AP40429 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.03□□□□□ -0.32
RPL13AP40429 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.03□□□□□ -0.32
RPL13AP40429 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RPL13AP40429 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.02□□□□□ -0.32
RPL13AP40429 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RPL13AP40429 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RPL13AP40429 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RPL13AP40429 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.02□□□□□ -0.32
RPL13AP40429 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RPL13AP40429 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
RPL13AP40429 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RPL13AP40429 AL354751.1-201ENST00000412768 1863 ntBASIC13.02□□□□□ -0.32
RPL13AP40429 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.02□□□□□ -0.32
RPL13AP40429 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RPL13AP40429 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RPL13AP40429 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
RPL13AP40429 AL356309.3-201ENST00000624132 1934 ntBASIC13.02□□□□□ -0.32
RPL13AP40429 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RPL13AP40429 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RPL13AP40429 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.02□□□□□ -0.33
RPL13AP40429 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.02□□□□□ -0.33
RPL13AP40429 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.02□□□□□ -0.33
RPL13AP40429 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.02□□□□□ -0.33
RPL13AP40429 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.02□□□□□ -0.33
RPL13AP40429 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.02□□□□□ -0.33
RPL13AP40429 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RPL13AP40429 WIZP1-201ENST00000531444 2299 ntBASIC13.02□□□□□ -0.33
RPL13AP40429 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RPL13AP40429 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms