Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NTF3P20783 AC124067.4-201ENST00000519691 2379 ntBASIC14.37□□□□□ -0.11
NTF3P20783 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.37□□□□□ -0.11
NTF3P20783 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.37□□□□□ -0.11
NTF3P20783 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
NTF3P20783 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NTF3P20783 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.36□□□□□ -0.11
NTF3P20783 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.36□□□□□ -0.11
NTF3P20783 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NTF3P20783 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
NTF3P20783 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
NTF3P20783 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NTF3P20783 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.35□□□□□ -0.11
NTF3P20783 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.35□□□□□ -0.11
NTF3P20783 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.35□□□□□ -0.11
NTF3P20783 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 AC019069.1-201ENST00000610008 1333 ntBASIC14.35□□□□□ -0.11
NTF3P20783 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.35□□□□□ -0.11
NTF3P20783 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NTF3P20783 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NTF3P20783 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.34□□□□□ -0.11
NTF3P20783 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
NTF3P20783 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.34□□□□□ -0.11
NTF3P20783 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.34□□□□□ -0.11
NTF3P20783 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NTF3P20783 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.34□□□□□ -0.11
NTF3P20783 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NTF3P20783 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NTF3P20783 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.34□□□□□ -0.11
NTF3P20783 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 CYP21A1P-202ENST00000354927 1481 ntBASIC14.34□□□□□ -0.11
NTF3P20783 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NTF3P20783 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms