Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
HCN1O60741 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.67■□□□□ 0.42
HCN1O60741 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HCN1O60741 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HCN1O60741 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HCN1O60741 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.66■□□□□ 0.42
HCN1O60741 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.66■□□□□ 0.42
HCN1O60741 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 AC097493.4-201ENST00000641197 219 ntBASIC17.66■□□□□ 0.42
HCN1O60741 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HCN1O60741 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.66■□□□□ 0.42
HCN1O60741 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HCN1O60741 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HCN1O60741 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
HCN1O60741 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
HCN1O60741 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.65■□□□□ 0.42
HCN1O60741 FSCN1P1-201ENST00000568912 1481 ntBASIC17.65■□□□□ 0.42
HCN1O60741 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HCN1O60741 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.65■□□□□ 0.42
HCN1O60741 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.65■□□□□ 0.42
HCN1O60741 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.65■□□□□ 0.42
HCN1O60741 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.65■□□□□ 0.42
HCN1O60741 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.65■□□□□ 0.42
HCN1O60741 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.65■□□□□ 0.42
HCN1O60741 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.65■□□□□ 0.42
HCN1O60741 AC131212.4-201ENST00000623606 975 ntBASIC17.65■□□□□ 0.42
HCN1O60741 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.65■□□□□ 0.42
HCN1O60741 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.65■□□□□ 0.42
HCN1O60741 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HCN1O60741 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HCN1O60741 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HCN1O60741 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.64■□□□□ 0.42
HCN1O60741 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
HCN1O60741 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HCN1O60741 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HCN1O60741 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HCN1O60741 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.64■□□□□ 0.41
HCN1O60741 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.64■□□□□ 0.41
HCN1O60741 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.64■□□□□ 0.41
HCN1O60741 AC012306.2-201ENST00000609350 630 ntBASIC17.64■□□□□ 0.41
HCN1O60741 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.64■□□□□ 0.41
HCN1O60741 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCN1O60741 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HCN1O60741 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.63■□□□□ 0.41
HCN1O60741 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms