Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.62■□□□□ 0.73
MSI1O43347 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.61■□□□□ 0.73
MSI1O43347 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.61■□□□□ 0.73
MSI1O43347 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.61■□□□□ 0.73
MSI1O43347 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 AL138966.2-201ENST00000621997 464 ntBASIC19.61■□□□□ 0.73
MSI1O43347 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.61■□□□□ 0.73
MSI1O43347 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MSI1O43347 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSI1O43347 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.61■□□□□ 0.73
MSI1O43347 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MSI1O43347 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MSI1O43347 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MSI1O43347 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.6■□□□□ 0.73
MSI1O43347 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MSI1O43347 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MSI1O43347 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 AC006011.2-201ENST00000621313 1158 ntBASIC19.6■□□□□ 0.73
MSI1O43347 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
MSI1O43347 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 AL512353.2-201ENST00000448759 1962 ntBASIC19.6■□□□□ 0.73
MSI1O43347 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MSI1O43347 AC036111.1-201ENST00000533973 1582 ntBASIC19.6■□□□□ 0.73
MSI1O43347 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MSI1O43347 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.6■□□□□ 0.73
MSI1O43347 RCC2P3-201ENST00000418112 1537 ntBASIC19.6■□□□□ 0.73
MSI1O43347 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
MSI1O43347 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 CR769767.2-201ENST00000622735 460 ntBASIC19.59■□□□□ 0.73
MSI1O43347 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MSI1O43347 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.59■□□□□ 0.73
MSI1O43347 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MSI1O43347 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.59■□□□□ 0.73
MSI1O43347 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.59■□□□□ 0.73
MSI1O43347 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MSI1O43347 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
MSI1O43347 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
MSI1O43347 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
MSI1O43347 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
MSI1O43347 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
MSI1O43347 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.58■□□□□ 0.73
MSI1O43347 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms