Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 MCCD1P1-208ENST00000445732 328 ntBASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC008556.1-201ENST00000610908 2040 ntBASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC004408.2-201ENST00000623613 2777 ntBASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRBV5-4A0A0C4DH59 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 ANO7L1-203ENST00000602586 1720 ntBASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-4A0A0C4DH59 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-4A0A0C4DH59 AL357033.4-201ENST00000617703 1807 ntBASIC18.58■□□□□ 0.57
TRBV5-4A0A0C4DH59 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-4A0A0C4DH59 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-4A0A0C4DH59 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 FAM87A-204ENST00000613235 858 ntBASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRBV5-4A0A0C4DH59 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 AC128688.1-201ENST00000487626 519 ntBASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 AC145285.6-201ENST00000604632 637 ntBASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 AC073912.3-201ENST00000624414 853 ntBASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRBV5-4A0A0C4DH59 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 MIR564-202ENST00000385049 94 ntBASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 WWOX-216ENST00000569818 525 ntBASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 MIR3180-5-201ENST00000583743 153 ntBASIC18.56■□□□□ 0.56
TRBV5-4A0A0C4DH59 AC012306.2-201ENST00000609350 630 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms