Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV13-1A0A0B4J241 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 AC079598.2-202ENST00000546624 1451 ntBASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 AC135050.7-201ENST00000624508 2218 ntBASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 AL031598.1-201ENST00000561511 1773 ntBASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-1A0A0B4J241 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms