Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AC004980.1-204ENST00000429707 299 ntBASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AL359736.2-201ENST00000621992 437 ntBASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA11Q9Y5H2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA11Q9Y5H2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 KRT16P1-201ENST00000399124 1418 ntBASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA11Q9Y5H2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 RPS2P4-201ENST00000476944 856 ntBASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA11Q9Y5H2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms