Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 AC069148.1-201ENST00000608741 768 ntBASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 AC093458.2-201ENST00000623150 629 ntBASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 AP000974.1-201ENST00000623909 2387 ntBASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA9Q9Y5G4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 KRT8P45-201ENST00000414328 1447 ntBASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 TNXA-203ENST00000507684 2038 ntBASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA9Q9Y5G4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 DUSP5P1-201ENST00000441325 1139 ntBASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 KRT18P38-201ENST00000449496 1282 ntBASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGA9Q9Y5G4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 STARP1-201ENST00000397973 869 ntBASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 AL450487.1-201ENST00000426799 995 ntBASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 HCG4P8-203ENST00000443049 980 ntBASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 VENTXP5-201ENST00000523979 775 ntBASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGA9Q9Y5G4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms