Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 AL390961.4-201ENST00000623958 2535 ntBASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 KRT8P8-201ENST00000434750 1448 ntBASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 MIR4785-201ENST00000585005 73 ntBASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 AIRN-201ENST00000601203 4374 ntBASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RABGEF1Q9UJ41 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AL355075.4-201ENST00000554988 638 ntBASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 LETM1P2-201ENST00000597330 2178 ntBASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 AC079598.2-202ENST00000546624 1451 ntBASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RABGEF1Q9UJ41 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RABGEF1Q9UJ41 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RABGEF1Q9UJ41 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RABGEF1Q9UJ41 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.7
RABGEF1Q9UJ41 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms