Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD9Q9P000 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COMMD9Q9P000 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.12■□□□□ 0.17
COMMD9Q9P000 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 MFSD11-216ENST00000590393 1141 ntBASIC16.11■□□□□ 0.17
COMMD9Q9P000 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
COMMD9Q9P000 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COMMD9Q9P000 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COMMD9Q9P000 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 AC141586.3-201ENST00000562166 1838 ntBASIC16.1■□□□□ 0.17
COMMD9Q9P000 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 AC137761.2-201ENST00000561729 223 ntBASIC16.1■□□□□ 0.17
COMMD9Q9P000 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 AC145350.3-201ENST00000569033 163 ntBASIC16.1■□□□□ 0.17
COMMD9Q9P000 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.1■□□□□ 0.17
COMMD9Q9P000 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COMMD9Q9P000 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
COMMD9Q9P000 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COMMD9Q9P000 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COMMD9Q9P000 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COMMD9Q9P000 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.09■□□□□ 0.17
COMMD9Q9P000 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.09■□□□□ 0.17
COMMD9Q9P000 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 HLA-G-202ENST00000376815 851 ntBASIC16.09■□□□□ 0.17
COMMD9Q9P000 HLA-G-203ENST00000376818 1127 ntBASIC16.09■□□□□ 0.17
COMMD9Q9P000 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COMMD9Q9P000 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms