Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 KRT16P5-201ENST00000455284 522 ntBASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 AC124016.1-201ENST00000609552 612 ntBASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 AC083906.6-201ENST00000641366 219 ntBASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 ANO7L1-203ENST00000602586 1720 ntBASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NLRC4Q9NPP4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NLRC4Q9NPP4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NLRC4Q9NPP4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
NLRC4Q9NPP4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 AC090164.3-201ENST00000610780 2143 ntBASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NLRC4Q9NPP4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 Z85996.1-201ENST00000494644 937 ntBASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 AC006058.3-201ENST00000606217 1069 ntBASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 AC073648.6-201ENST00000641589 218 ntBASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NLRC4Q9NPP4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.49■□□□□ 0.87
NLRC4Q9NPP4 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms