Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NEUROD4Q9HD90 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 MIR718-201ENST00000390190 70 ntBASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 AC131212.4-201ENST00000623606 975 ntBASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NEUROD4Q9HD90 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 AP002982.1-201ENST00000492365 877 ntBASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.86■□□□□ 0.45
NEUROD4Q9HD90 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 PRSS44-201ENST00000515154 1146 ntBASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NEUROD4Q9HD90 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.84■□□□□ 0.45
NEUROD4Q9HD90 HTR7P1-201ENST00000538670 1336 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms