Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 DUSP5P2-201ENST00000426873 1033 ntBASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 TUBB8P6-201ENST00000436895 1288 ntBASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 HMGB3P14-201ENST00000494195 599 ntBASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 MAX-217ENST00000557277 728 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 AC020763.4-201ENST00000623414 4170 ntBASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 AC139713.2-201ENST00000641328 2723 ntBASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-1Q9BYR8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 NFYC-AS1-201ENST00000606277 1687 ntBASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 MIPEPP3-201ENST00000412105 444 ntBASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 SERPINH1P1-201ENST00000419794 1249 ntBASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 TSPY23P-201ENST00000440136 739 ntBASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 RAP2CP1-201ENST00000605103 478 ntBASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 AL121906.2-201ENST00000621597 723 ntBASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-1Q9BYR8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.88
KRTAP3-1Q9BYR8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
KRTAP3-1Q9BYR8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
KRTAP3-1Q9BYR8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 HEIH-201ENST00000623091 1652 ntBASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 LINC00896-202ENST00000609602 2128 ntBASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 MTMR9LP-203ENST00000426597 1545 ntBASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP3-1Q9BYR8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms