Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE1Q99829 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE1Q99829 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE1Q99829 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CPNE1Q99829 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE1Q99829 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE1Q99829 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPNE1Q99829 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 AC026366.1-201ENST00000488803 879 ntBASIC18.93■□□□□ 0.62
CPNE1Q99829 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CPNE1Q99829 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE1Q99829 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE1Q99829 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE1Q99829 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CPNE1Q99829 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE1Q99829 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPNE1Q99829 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.92■□□□□ 0.62
CPNE1Q99829 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE1Q99829 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPNE1Q99829 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.92■□□□□ 0.62
CPNE1Q99829 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 AL354751.1-201ENST00000412768 1863 ntBASIC18.92■□□□□ 0.62
CPNE1Q99829 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CPNE1Q99829 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE1Q99829 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE1Q99829 HEIH-201ENST00000623091 1652 ntBASIC18.92■□□□□ 0.62
CPNE1Q99829 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE1Q99829 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPNE1Q99829 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPNE1Q99829 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE1Q99829 AC073592.3-201ENST00000625118 1834 ntBASIC18.91■□□□□ 0.62
CPNE1Q99829 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE1Q99829 KRT16P5-201ENST00000455284 522 ntBASIC18.91■□□□□ 0.62
CPNE1Q99829 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
CPNE1Q99829 Z85996.1-201ENST00000494644 937 ntBASIC18.91■□□□□ 0.62
CPNE1Q99829 RNA5SP413-201ENST00000516373 109 ntBASIC18.91■□□□□ 0.62
CPNE1Q99829 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE1Q99829 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE1Q99829 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE1Q99829 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.91■□□□□ 0.62
CPNE1Q99829 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE1Q99829 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPNE1Q99829 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE1Q99829 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE1Q99829 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms