Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.07■□□□□ 0.32
SPENQ96T58 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.07■□□□□ 0.32
SPENQ96T58 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.07■□□□□ 0.32
SPENQ96T58 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPENQ96T58 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SPENQ96T58 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.07■□□□□ 0.32
SPENQ96T58 AC004870.1-201ENST00000315132 882 ntBASIC17.07■□□□□ 0.32
SPENQ96T58 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.07■□□□□ 0.32
SPENQ96T58 RNF126P1-202ENST00000569893 925 ntBASIC17.07■□□□□ 0.32
SPENQ96T58 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.07■□□□□ 0.32
SPENQ96T58 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
SPENQ96T58 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
SPENQ96T58 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 AC243591.1-201ENST00000452967 1364 ntBASIC17.07■□□□□ 0.32
SPENQ96T58 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.07■□□□□ 0.32
SPENQ96T58 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.07■□□□□ 0.32
SPENQ96T58 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.07■□□□□ 0.32
SPENQ96T58 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.07■□□□□ 0.32
SPENQ96T58 AC091304.2-201ENST00000564639 760 ntBASIC17.07■□□□□ 0.32
SPENQ96T58 AC012615.1-201ENST00000565797 1299 ntBASIC17.07■□□□□ 0.32
SPENQ96T58 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.07■□□□□ 0.32
SPENQ96T58 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.06■□□□□ 0.32
SPENQ96T58 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.06■□□□□ 0.32
SPENQ96T58 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.06■□□□□ 0.32
SPENQ96T58 AL121912.1-201ENST00000603683 238 ntBASIC17.06■□□□□ 0.32
SPENQ96T58 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.06■□□□□ 0.32
SPENQ96T58 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 AC008556.1-201ENST00000610908 2040 ntBASIC17.06■□□□□ 0.32
SPENQ96T58 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SPENQ96T58 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
SPENQ96T58 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.06■□□□□ 0.32
SPENQ96T58 AC093525.10-201ENST00000625130 1569 ntBASIC17.06■□□□□ 0.32
SPENQ96T58 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.06■□□□□ 0.32
SPENQ96T58 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 MIR574-201ENST00000385209 96 ntBASIC17.06■□□□□ 0.32
SPENQ96T58 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SPENQ96T58 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.06■□□□□ 0.32
SPENQ96T58 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPENQ96T58 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SPENQ96T58 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.05■□□□□ 0.32
SPENQ96T58 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 PMS2P1-201ENST00000431037 1228 ntBASIC17.05■□□□□ 0.32
SPENQ96T58 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.05■□□□□ 0.32
SPENQ96T58 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.05■□□□□ 0.32
SPENQ96T58 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.05■□□□□ 0.32
SPENQ96T58 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SPENQ96T58 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.05■□□□□ 0.32
SPENQ96T58 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SPENQ96T58 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPENQ96T58 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.05■□□□□ 0.32
SPENQ96T58 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.05■□□□□ 0.32
SPENQ96T58 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPENQ96T58 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.05■□□□□ 0.32
SPENQ96T58 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SPENQ96T58 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.04■□□□□ 0.32
SPENQ96T58 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SPENQ96T58 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.04■□□□□ 0.32
SPENQ96T58 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms