Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40CQ96S21 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40CQ96S21 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 AL390719.1-204ENST00000412397 1219 ntBASIC15.35■□□□□ 0.05
RAB40CQ96S21 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40CQ96S21 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40CQ96S21 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.35■□□□□ 0.05
RAB40CQ96S21 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 AC010980.2-201ENST00000587099 1412 ntBASIC15.34■□□□□ 0.05
RAB40CQ96S21 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 CYP2T1P-201ENST00000432607 1285 ntBASIC15.34■□□□□ 0.05
RAB40CQ96S21 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 AC011767.1-201ENST00000617410 1153 ntBASIC15.34■□□□□ 0.05
RAB40CQ96S21 BID-214ENST00000617586 542 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 OR10C1-204ENST00000622521 1039 ntBASIC15.34■□□□□ 0.05
RAB40CQ96S21 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40CQ96S21 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms