Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L1Q8WWY6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 AC138028.4-201ENST00000564984 1845 ntBASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 AC135776.1-201ENST00000319817 2481 ntBASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.85□□□□□ -0.03
MBD3L1Q8WWY6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 KRT18P68-201ENST00000392293 1000 ntBASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 AC016405.3-201ENST00000607710 860 ntBASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L1Q8WWY6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L1Q8WWY6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L1Q8WWY6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MBD3L1Q8WWY6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.83□□□□□ -0.03
MBD3L1Q8WWY6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.83□□□□□ -0.03
MBD3L1Q8WWY6 TNRC18P3-201ENST00000441896 2691 ntBASIC14.83□□□□□ -0.03
MBD3L1Q8WWY6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
MBD3L1Q8WWY6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms