Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 POM121L13P-201ENST00000422362 380 ntBASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 AP003097.1-201ENST00000530657 1135 ntBASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 AL121829.2-201ENST00000620908 328 ntBASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 AL354751.1-201ENST00000412768 1863 ntBASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN4IP1Q8WWV3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 AC008403.3-201ENST00000598924 454 ntBASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN4IP1Q8WWV3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN4IP1Q8WWV3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms