Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AL160286.2-201ENST00000567150 934 ntBASIC28.25■■■□□ 2.11
CCER1Q8TC90 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 NBPF21P-201ENST00000425093 1451 ntBASIC28.25■■■□□ 2.11
CCER1Q8TC90 COBL-210ENST00000632460 1941 ntTSL 5 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC28.25■■■□□ 2.11
CCER1Q8TC90 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCER1Q8TC90 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 PRKY-204ENST00000533551 1019 ntBASIC28.24■■■□□ 2.11
CCER1Q8TC90 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
CCER1Q8TC90 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 EFTUD1P1-204ENST00000560401 1798 ntBASIC28.24■■■□□ 2.11
CCER1Q8TC90 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCER1Q8TC90 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 TSPY21P-201ENST00000433481 731 ntBASIC28.23■■■□□ 2.11
CCER1Q8TC90 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 UNC93B5-201ENST00000530315 699 ntBASIC28.23■■■□□ 2.11
CCER1Q8TC90 AC008403.3-201ENST00000598924 454 ntBASIC28.23■■■□□ 2.11
CCER1Q8TC90 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCER1Q8TC90 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC28.23■■■□□ 2.11
CCER1Q8TC90 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
CCER1Q8TC90 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCER1Q8TC90 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 C1QL1P1-201ENST00000568105 661 ntBASIC28.21■■■□□ 2.11
CCER1Q8TC90 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 AL354751.1-201ENST00000412768 1863 ntBASIC28.21■■■□□ 2.11
CCER1Q8TC90 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC28.21■■■□□ 2.11
CCER1Q8TC90 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCER1Q8TC90 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCER1Q8TC90 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC28.2■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms