Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB3IL1Q8TBN0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 AC073592.3-201ENST00000625118 1834 ntBASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 AL162741.1-201ENST00000565563 1558 ntBASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 MKRN4P-201ENST00000444706 1521 ntBASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 AL133373.2-201ENST00000623187 2828 ntBASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 AC231657.2-201ENST00000624556 255 ntBASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 AC068880.1-201ENST00000507289 2297 ntBASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB3IL1Q8TBN0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms