Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.07■■□□□ 1.28
SLX4Q8IY92 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 PMS2P1-201ENST00000431037 1228 ntBASIC23.07■■□□□ 1.28
SLX4Q8IY92 AP003733.1-201ENST00000491725 852 ntBASIC23.07■■□□□ 1.28
SLX4Q8IY92 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.07■■□□□ 1.28
SLX4Q8IY92 TCF3P1-201ENST00000423021 1937 ntBASIC23.07■■□□□ 1.28
SLX4Q8IY92 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.07■■□□□ 1.28
SLX4Q8IY92 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLX4Q8IY92 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 AL590627.1-203ENST00000421194 1026 ntBASIC23.06■■□□□ 1.28
SLX4Q8IY92 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 AL773604.1-201ENST00000617417 272 ntBASIC23.06■■□□□ 1.28
SLX4Q8IY92 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLX4Q8IY92 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.06■■□□□ 1.28
SLX4Q8IY92 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.05■■□□□ 1.28
SLX4Q8IY92 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.05■■□□□ 1.28
SLX4Q8IY92 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SLX4Q8IY92 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.05■■□□□ 1.28
SLX4Q8IY92 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.05■■□□□ 1.28
SLX4Q8IY92 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 AC007375.3-201ENST00000600936 2314 ntBASIC23.05■■□□□ 1.28
SLX4Q8IY92 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.05■■□□□ 1.28
SLX4Q8IY92 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLX4Q8IY92 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 NUS1P2-201ENST00000417358 873 ntBASIC23.04■■□□□ 1.28
SLX4Q8IY92 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 LINC01711-201ENST00000598340 967 ntBASIC23.04■■□□□ 1.28
SLX4Q8IY92 GABARAPL3-202ENST00000624044 1851 ntBASIC23.04■■□□□ 1.28
SLX4Q8IY92 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLX4Q8IY92 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.04■■□□□ 1.28
SLX4Q8IY92 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLX4Q8IY92 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLX4Q8IY92 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 AC008556.1-201ENST00000610908 2040 ntBASIC23.03■■□□□ 1.28
SLX4Q8IY92 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLX4Q8IY92 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLX4Q8IY92 RCC2P3-201ENST00000418112 1537 ntBASIC23.03■■□□□ 1.28
SLX4Q8IY92 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLX4Q8IY92 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 AC005332.3-201ENST00000589904 676 ntBASIC23.03■■□□□ 1.28
SLX4Q8IY92 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.03■■□□□ 1.28
SLX4Q8IY92 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.03■■□□□ 1.28
SLX4Q8IY92 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms